Carnation DB

Dca50780.1

Annotation

5-exons
f-1
sp|B9HZX4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568934#GO:0000166;GO:0016630#2F0P0C
AT5G54190.1 | Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992773 REVERSE LENGTH=405
Repeat List (scaffold6496)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50780.1	1	396	640	50.46	396	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HZX4_POPTR	1	393	399	98.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50780.1	1	396	640	49.53	396	80	0
Target_name	Start	End	Length	Cov(%)
AT5G54190.1	1	399	405	98.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6496	Augus-PASA	mRNA	7129	11095	.	+	.	ID=Dca50780.1;Parent=Dca50780
scaffold6496	Augus-PASA	exon	7129	7182	.	+	.	ID=Dca50780.1.exon1;Parent=Dca50780.1
scaffold6496	Augus-PASA	exon	7534	7632	.	+	.	ID=Dca50780.1.exon2;Parent=Dca50780.1
scaffold6496	Augus-PASA	exon	7763	8303	.	+	.	ID=Dca50780.1.exon3;Parent=Dca50780.1
scaffold6496	Augustus	exon	8396	8880	.	+	.	ID=Dca50780.1.exon4;Parent=Dca50780.1
scaffold6496	Augustus	exon	10352	11095	.	+	.	ID=Dca50780.1.exon5;Parent=Dca50780.1