Carnation DB

Dca50952.1

Annotation

8-exons
f-1
sp|B4FJX6_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#GO:0005737;GO:0004427;GO:0000287;GO:0006796#2F1P1C
Os05t0114000-01 Similar to PRLI-interacting factor F (Fragment).
Repeat List (scaffold6536)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50952.1	1	217	217	86.17	217	87	3e-107
Target_name	Start	End	Length	Cov(%)
sp\|B4FJX6_MAIZE	1	214	214	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50952.1	1	217	217	84.33	217	85	2e-106
Target_name	Start	End	Length	Cov(%)
Os05t0114000-01	1	216	217	99.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6536	Augus-PASA	mRNA	5067	6902	.	-	.	ID=Dca50952.1;Parent=Dca50952
scaffold6536	Augus-PASA	exon	5067	5109	.	-	.	ID=Dca50952.1.exon1;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	5501	5582	.	-	.	ID=Dca50952.1.exon2;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	5728	5848	.	-	.	ID=Dca50952.1.exon3;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	5928	5993	.	-	.	ID=Dca50952.1.exon4;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	6243	6350	.	-	.	ID=Dca50952.1.exon5;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	6442	6507	.	-	.	ID=Dca50952.1.exon6;Parent=Dca50952.1
scaffold6536	Augus-PASA	exon	6620	6648	.	-	.	ID=Dca50952.1.exon7;Parent=Dca50952.1
scaffold6536	Augustus	exon	6764	6902	.	-	.	ID=Dca50952.1.exon8;Parent=Dca50952.1