Carnation DB

Dca51954.1

Annotation

5-exons
f-1
sp|B9ICR0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575644#unknown#0F0P0C
AT3G54070.1 | Symbols: | Ankyrin repeat family protein | chr3:20021330-20023603 REVERSE LENGTH=574
Repeat List (scaffold6797)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51954.1	1	436	447	45.41	436	45	4e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9ICR0_POPTR	200	652	743	60.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51954.1	1	442	447	38.47	442	37	3e-74
Target_name	Start	End	Length	Cov(%)
AT3G54070.1	59	486	574	74.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6797	Augustus	mRNA	23189	25236	.	-	.	ID=Dca51954.1;Parent=Dca51954
scaffold6797	Augustus	exon	23189	23228	.	-	.	ID=Dca51954.1.exon1;Parent=Dca51954.1
scaffold6797	Augustus	exon	23330	23628	.	-	.	ID=Dca51954.1.exon2;Parent=Dca51954.1
scaffold6797	Augustus	exon	23984	24408	.	-	.	ID=Dca51954.1.exon3;Parent=Dca51954.1
scaffold6797	Augustus	exon	24529	24681	.	-	.	ID=Dca51954.1.exon4;Parent=Dca51954.1
scaffold6797	Augustus	exon	24810	25236	.	-	.	ID=Dca51954.1.exon5;Parent=Dca51954.1