Dca53072.1
Annotation
- 4-exons
- f-1
- sp|D7T7A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04910#GO:0005634;GO:0003677;GO:0006310;GO:0006302#1F2P1C
- Os03t0740800-01 DNA double-strand break repair and VJ recombination XRCC4, C-terminal domain containing protein.
- Repeat List (scaffold7042)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53072.1 |
15 |
126 |
184 |
39.13 |
112 |
65 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T7A5_VITVI |
6 |
111 |
258 |
41.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53072.1 |
15 |
146 |
184 |
35.32 |
132 |
50 |
6e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0740800-01 |
9 |
134 |
275 |
45.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7042 |
Augustus |
mRNA |
10780 |
12924 |
. |
- |
. |
ID=Dca53072.1;Parent=Dca53072 |
| scaffold7042 |
Augustus |
exon |
10780 |
10955 |
. |
- |
. |
ID=Dca53072.1.exon1;Parent=Dca53072.1 |
| scaffold7042 |
Augustus |
exon |
11367 |
11418 |
. |
- |
. |
ID=Dca53072.1.exon2;Parent=Dca53072.1 |
| scaffold7042 |
Augustus |
exon |
12265 |
12407 |
. |
- |
. |
ID=Dca53072.1.exon3;Parent=Dca53072.1 |
| scaffold7042 |
Augustus |
exon |
12741 |
12924 |
. |
- |
. |
ID=Dca53072.1.exon4;Parent=Dca53072.1 |
