Carnation DB

Dca53618.1

Annotation

6-exons
f-1
sp|B9GM82_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814847#GO:0003824#1F0P0C
Repeat List (scaffold72)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53618.1	7	239	568	20.59	233	49	3e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9GM82_POPTR	4	235	858	27.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53618.1	102	239	568	15.49	138	64	1e-46
Target_name	Start	End	Length	Cov(%)
Os02t0195500-01	136	273	892	15.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold72	Augustus	mRNA	80289	84481	.	-	.	ID=Dca53618.1;Parent=Dca53618
scaffold72	Augustus	exon	80289	81010	.	-	.	ID=Dca53618.1.exon1;Parent=Dca53618.1
scaffold72	Augustus	exon	81156	81245	.	-	.	ID=Dca53618.1.exon2;Parent=Dca53618.1
scaffold72	Augustus	exon	81347	81449	.	-	.	ID=Dca53618.1.exon3;Parent=Dca53618.1
scaffold72	Augustus	exon	82143	82220	.	-	.	ID=Dca53618.1.exon4;Parent=Dca53618.1
scaffold72	Augustus	exon	83500	83702	.	-	.	ID=Dca53618.1.exon5;Parent=Dca53618.1
scaffold72	Augustus	exon	83971	84481	.	-	.	ID=Dca53618.1.exon6;Parent=Dca53618.1