Dca53625.1
Annotation
- 4-exons
- f-1
- sp|F8WLB4_CITUN#Mechanosensitive ion channel domain-containing protein#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF47#GO:0016020;GO:0055085#0F1P1C
- Repeat List (scaffold72)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53625.1 |
12 |
236 |
261 |
31.41 |
225 |
36 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F8WLB4_CITUN |
448 |
664 |
694 |
31.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53625.1 |
6 |
237 |
261 |
29.5 |
232 |
33 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G12080.1 |
491 |
714 |
734 |
30.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold72 |
Augustus |
mRNA |
128796 |
129840 |
. |
+ |
. |
ID=Dca53625.1;Parent=Dca53625 |
| scaffold72 |
Augustus |
exon |
128796 |
129101 |
. |
+ |
. |
ID=Dca53625.1.exon1;Parent=Dca53625.1 |
| scaffold72 |
Augustus |
exon |
129180 |
129391 |
. |
+ |
. |
ID=Dca53625.1.exon2;Parent=Dca53625.1 |
| scaffold72 |
Augustus |
exon |
129484 |
129707 |
. |
+ |
. |
ID=Dca53625.1.exon3;Parent=Dca53625.1 |
| scaffold72 |
Augustus |
exon |
129797 |
129840 |
. |
+ |
. |
ID=Dca53625.1.exon4;Parent=Dca53625.1 |
