Carnation DB

Dca53635.1

Annotation

12-exons
f-1
sp|E0CS89_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g01290#GO:0003677;GO:0008270#2F0P0C
sp|B9SEU6_RICCO#Polynucleotide kinase-3'-phosphatase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0105580#GO:0003677;GO:0016301;GO:0046403;GO:0008270#4F0P0C
Repeat List (scaffold72)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53635.1	5	342	344	64.82	338	65	1e-122
Target_name	Start	End	Length	Cov(%)
sp\|E0CS89_VITVI	9	354	354	97.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53635.1	2	81	344	10.17	80	44	1e-08
Target_name	Start	End	Length	Cov(%)
AT3G14890.1	162	240	694	11.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold72	Augus-PASA	mRNA	245346	252018	.	-	.	ID=Dca53635.1;Parent=Dca53635
scaffold72	Augus-PASA	exon	245346	245399	.	-	.	ID=Dca53635.1.exon1;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	246163	246232	.	-	.	ID=Dca53635.1.exon2;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	246321	246442	.	-	.	ID=Dca53635.1.exon3;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	246897	247013	.	-	.	ID=Dca53635.1.exon4;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	247102	247183	.	-	.	ID=Dca53635.1.exon5;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	247332	247408	.	-	.	ID=Dca53635.1.exon6;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	247737	247793	.	-	.	ID=Dca53635.1.exon7;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	247963	248031	.	-	.	ID=Dca53635.1.exon8;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	250280	250336	.	-	.	ID=Dca53635.1.exon9;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	250822	250884	.	-	.	ID=Dca53635.1.exon10;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	251660	251707	.	-	.	ID=Dca53635.1.exon11;Parent=Dca53635.1
scaffold72	Augus-PASA	exon	251800	252018	.	-	.	ID=Dca53635.1.exon12;Parent=Dca53635.1