Dca53830.1
Annotation
- 3-exons
- f-1
- sp|D7L322_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_477786#GO:0005488#1F0P0C
- AT3G05040.1 | Symbols: HST, HST1 | ARM repeat superfamily protein | chr3:1401479-1408095 REVERSE LENGTH=1202
- Repeat List (scaffold726)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53830.1 |
30 |
167 |
170 |
55.29 |
138 |
69 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L322_ARALL |
640 |
777 |
1202 |
11.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53830.1 |
30 |
167 |
170 |
55.29 |
138 |
69 |
3e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05040.1 |
640 |
777 |
1202 |
11.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold726 |
Augustus |
mRNA |
36017 |
37661 |
. |
- |
. |
ID=Dca53830.1;Parent=Dca53830 |
| scaffold726 |
Augustus |
exon |
36017 |
36338 |
. |
- |
. |
ID=Dca53830.1.exon1;Parent=Dca53830.1 |
| scaffold726 |
Augustus |
exon |
36423 |
36526 |
. |
- |
. |
ID=Dca53830.1.exon2;Parent=Dca53830.1 |
| scaffold726 |
Augustus |
exon |
37575 |
37661 |
. |
- |
. |
ID=Dca53830.1.exon3;Parent=Dca53830.1 |
