Carnation DB

Dca57823.1

Annotation

12-exons
f-1
sp|D7M9V2_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_658534#unknown#0F0P0C
AT4G16440.1 | Symbols: | ferredoxin hydrogenases | chr4:9269263-9271510 REVERSE LENGTH=474
Repeat List (scaffold8397)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57823.1	2	491	491	63.13	490	64	0
Target_name	Start	End	Length	Cov(%)
sp\|D7M9V2_ARALL	42	474	474	91.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57823.1	2	491	491	62.11	490	63	0
Target_name	Start	End	Length	Cov(%)
AT4G16440.1	42	474	474	91.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8397	Augustus	mRNA	1967	5965	.	+	.	ID=Dca57823.1;Parent=Dca57823
scaffold8397	Augustus	exon	1967	2040	.	+	.	ID=Dca57823.1.exon1;Parent=Dca57823.1
scaffold8397	Augustus	exon	2595	2748	.	+	.	ID=Dca57823.1.exon2;Parent=Dca57823.1
scaffold8397	Augustus	exon	3563	3749	.	+	.	ID=Dca57823.1.exon3;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	3873	3999	.	+	.	ID=Dca57823.1.exon4;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	4161	4338	.	+	.	ID=Dca57823.1.exon5;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	4422	4471	.	+	.	ID=Dca57823.1.exon6;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	4549	4720	.	+	.	ID=Dca57823.1.exon7;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	4810	4936	.	+	.	ID=Dca57823.1.exon8;Parent=Dca57823.1
scaffold8397	Augustus	exon	5019	5110	.	+	.	ID=Dca57823.1.exon9;Parent=Dca57823.1
scaffold8397	Augustus	exon	5194	5263	.	+	.	ID=Dca57823.1.exon10;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	5346	5437	.	+	.	ID=Dca57823.1.exon11;Parent=Dca57823.1
scaffold8397	Augus-PASA	exon	5813	5965	.	+	.	ID=Dca57823.1.exon12;Parent=Dca57823.1