Carnation DB

Dca59749.1

Annotation

8-exons
f-1
sp|B9IDA8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_902625#GO:0005524;GO:0004672#2F0P0C
Os02t0666300-01 Similar to MAP3Ka.
Repeat List (scaffold899)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59749.1	561	760	763	13.23	200	50	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|B9IDA8_POPTR	696	899	902	22.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59749.1	571	668	763	6.29	98	49	1e-16
Target_name	Start	End	Length	Cov(%)
Os02t0666300-01	698	795	895	10.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold899	Augustus	mRNA	86624	92095	.	-	.	ID=Dca59749.1;Parent=Dca59749
scaffold899	Augustus	exon	86624	87128	.	-	.	ID=Dca59749.1.exon1;Parent=Dca59749.1
scaffold899	Augustus	exon	87761	87852	.	-	.	ID=Dca59749.1.exon2;Parent=Dca59749.1
scaffold899	Augustus	exon	89141	89216	.	-	.	ID=Dca59749.1.exon3;Parent=Dca59749.1
scaffold899	Augustus	exon	89575	89735	.	-	.	ID=Dca59749.1.exon4;Parent=Dca59749.1
scaffold899	Augustus	exon	89917	89979	.	-	.	ID=Dca59749.1.exon5;Parent=Dca59749.1
scaffold899	Augustus	exon	90448	90535	.	-	.	ID=Dca59749.1.exon6;Parent=Dca59749.1
scaffold899	Augustus	exon	90642	91388	.	-	.	ID=Dca59749.1.exon7;Parent=Dca59749.1
scaffold899	Augustus	exon	91536	92095	.	-	.	ID=Dca59749.1.exon8;Parent=Dca59749.1