Carnation DB

Dca59750.1

Annotation

10-exons
f-1
sp|A9PET0_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016021;GO:0005886;GO:0009306#0F1P2C
AT5G52440.1 | Symbols: HCF106 | Bacterial sec-independent translocation protein mttA/Hcf106 | chr5:21286896-21288613 FORWARD LENGTH=260
Repeat List (scaffold899)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59750.1	3	190	403	24.81	188	53	6e-43
Target_name	Start	End	Length	Cov(%)
sp\|A9PET0_POPTR	10	189	259	69.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59750.1	49	170	403	20.84	122	69	1e-41
Target_name	Start	End	Length	Cov(%)
AT5G52440.1	43	162	260	46.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold899	Augustus	mRNA	95320	101376	.	+	.	ID=Dca59750.1;Parent=Dca59750
scaffold899	Augustus	exon	95320	95551	.	+	.	ID=Dca59750.1.exon1;Parent=Dca59750.1
scaffold899	Augustus	exon	95864	95985	.	+	.	ID=Dca59750.1.exon2;Parent=Dca59750.1
scaffold899	Augustus	exon	96761	96820	.	+	.	ID=Dca59750.1.exon3;Parent=Dca59750.1
scaffold899	Augustus	exon	96899	97055	.	+	.	ID=Dca59750.1.exon4;Parent=Dca59750.1
scaffold899	Augustus	exon	97801	97922	.	+	.	ID=Dca59750.1.exon5;Parent=Dca59750.1
scaffold899	Augustus	exon	98698	98757	.	+	.	ID=Dca59750.1.exon6;Parent=Dca59750.1
scaffold899	Augustus	exon	98836	98992	.	+	.	ID=Dca59750.1.exon7;Parent=Dca59750.1
scaffold899	Augustus	exon	99607	99813	.	+	.	ID=Dca59750.1.exon8;Parent=Dca59750.1
scaffold899	Augustus	exon	101184	101216	.	+	.	ID=Dca59750.1.exon9;Parent=Dca59750.1
scaffold899	Augustus	exon	101315	101376	.	+	.	ID=Dca59750.1.exon10;Parent=Dca59750.1