Dca6859.1
Annotation
- 2-exons
- f-1
- sp|B9HEL6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1083368#unknown#0F0P0C
- AT3G50780.1 | Symbols: | BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:18875662-18877341 REVERSE LENGTH=520
- Repeat List (scaffold1272)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6859.1 |
1 |
534 |
556 |
64.38 |
534 |
66 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HEL6_POPTR |
1 |
532 |
536 |
99.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca6859.1 |
1 |
533 |
556 |
58.63 |
533 |
61 |
1e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G50780.1 |
1 |
518 |
520 |
99.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1272 |
Augustus |
mRNA |
42439 |
44180 |
. |
+ |
. |
ID=Dca6859.1;Parent=Dca6859 |
| scaffold1272 |
Augustus |
exon |
42439 |
43092 |
. |
+ |
. |
ID=Dca6859.1.exon1;Parent=Dca6859.1 |
| scaffold1272 |
Augustus |
exon |
43164 |
44180 |
. |
+ |
. |
ID=Dca6859.1.exon2;Parent=Dca6859.1 |
