Dca7021.1
Annotation
- 4-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|O82276_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g31080#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold12803)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7021.1 |
34 |
265 |
590 |
23.05 |
232 |
49 |
7e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
7 |
283 |
1378 |
20.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7021.1 |
215 |
586 |
590 |
19.83 |
372 |
31 |
9e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
421 |
789 |
857 |
43.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12803 |
Augustus |
mRNA |
1 |
3520 |
. |
+ |
. |
ID=Dca7021.1;Parent=Dca7021 |
| scaffold12803 |
Augustus |
exon |
1 |
115 |
. |
+ |
. |
ID=Dca7021.1.exon1;Parent=Dca7021.1 |
| scaffold12803 |
Augustus |
exon |
307 |
709 |
. |
+ |
. |
ID=Dca7021.1.exon2;Parent=Dca7021.1 |
| scaffold12803 |
Augustus |
exon |
836 |
1115 |
. |
+ |
. |
ID=Dca7021.1.exon3;Parent=Dca7021.1 |
| scaffold12803 |
Augustus |
exon |
2546 |
3520 |
. |
+ |
. |
ID=Dca7021.1.exon4;Parent=Dca7021.1 |
