Dca7038.1
Annotation
- 3-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12812)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7038.1 |
4 |
142 |
219 |
37.44 |
139 |
57 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
280 |
425 |
1038 |
14.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca7038.1 |
6 |
140 |
219 |
22.37 |
135 |
31 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
289 |
448 |
1428 |
11.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12812 |
Augustus |
mRNA |
804 |
2920 |
. |
- |
. |
ID=Dca7038.1;Parent=Dca7038 |
| scaffold12812 |
Augustus |
exon |
804 |
989 |
. |
- |
. |
ID=Dca7038.1.exon1;Parent=Dca7038.1 |
| scaffold12812 |
Augustus |
exon |
1078 |
1128 |
. |
- |
. |
ID=Dca7038.1.exon2;Parent=Dca7038.1 |
| scaffold12812 |
Augustus |
exon |
2498 |
2920 |
. |
- |
. |
ID=Dca7038.1.exon3;Parent=Dca7038.1 |
