Dca8552.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold13600)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8552.1 |
7 |
1387 |
1409 |
53.44 |
1381 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
70 |
1490 |
1501 |
94.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8552.1 |
1127 |
1390 |
1409 |
6.31 |
264 |
33 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1223 |
1480 |
1539 |
16.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold13600 |
Augustus |
mRNA |
121 |
4478 |
. |
+ |
. |
ID=Dca8552.1;Parent=Dca8552 |
| scaffold13600 |
Augustus |
exon |
121 |
3313 |
. |
+ |
. |
ID=Dca8552.1.exon1;Parent=Dca8552.1 |
| scaffold13600 |
Augustus |
exon |
3442 |
4478 |
. |
+ |
. |
ID=Dca8552.1.exon2;Parent=Dca8552.1 |
