Carnation DB

Dca17340.1

Annotation

12-exons
f-1
sp|D7T2M6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0094g01410#GO:0005622;GO:0005524;GO:0047325;GO:0052726;GO:0052725;GO:0000287;GO:0032957#5F1P1C
sp|B9SSZ4_RICCO#Inositol-tetrakisphosphate 1-kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1269170#GO:0005622;GO:0005524;GO:0047325;GO:0052726;GO:0052725;GO:0000287;GO:0032957#5F1P1C
Repeat List (scaffold188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17340.1	4	492	494	57.08	489	57	6e-158
Target_name	Start	End	Length	Cov(%)
sp\|D7T2M6_VITVI	5	505	515	97.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17340.1	4	491	494	51.41	488	52	2e-140
Target_name	Start	End	Length	Cov(%)
AT2G43980.1	1	487	488	99.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold188	Augustus	mRNA	229615	235991	.	-	.	ID=Dca17340.1;Parent=Dca17340
scaffold188	Augustus	exon	229615	229764	.	-	.	ID=Dca17340.1.exon1;Parent=Dca17340.1
scaffold188	Augustus	exon	229843	229972	.	-	.	ID=Dca17340.1.exon2;Parent=Dca17340.1
scaffold188	Augustus	exon	230057	230202	.	-	.	ID=Dca17340.1.exon3;Parent=Dca17340.1
scaffold188	Augustus	exon	230426	230488	.	-	.	ID=Dca17340.1.exon4;Parent=Dca17340.1
scaffold188	Augustus	exon	230686	230799	.	-	.	ID=Dca17340.1.exon5;Parent=Dca17340.1
scaffold188	Augustus	exon	231244	231397	.	-	.	ID=Dca17340.1.exon6;Parent=Dca17340.1
scaffold188	Augustus	exon	232183	232382	.	-	.	ID=Dca17340.1.exon7;Parent=Dca17340.1
scaffold188	Augustus	exon	233021	233089	.	-	.	ID=Dca17340.1.exon8;Parent=Dca17340.1
scaffold188	Augustus	exon	233856	233953	.	-	.	ID=Dca17340.1.exon9;Parent=Dca17340.1
scaffold188	Augustus	exon	234535	234733	.	-	.	ID=Dca17340.1.exon10;Parent=Dca17340.1
scaffold188	Augustus	exon	235218	235253	.	-	.	ID=Dca17340.1.exon11;Parent=Dca17340.1
scaffold188	Augustus	exon	235866	235991	.	-	.	ID=Dca17340.1.exon12;Parent=Dca17340.1