Dca19751.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQM0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g11240#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2035)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19751.1 |
39 |
242 |
376 |
24.73 |
204 |
46 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQM0_ARATH |
345 |
548 |
1044 |
19.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19751.1 |
39 |
242 |
376 |
19.14 |
204 |
36 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
439 |
641 |
857 |
23.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2035 |
Augustus |
mRNA |
36378 |
37722 |
. |
- |
. |
ID=Dca19751.1;Parent=Dca19751 |
| scaffold2035 |
Augustus |
exon |
36378 |
36406 |
. |
- |
. |
ID=Dca19751.1.exon1;Parent=Dca19751.1 |
| scaffold2035 |
Augustus |
exon |
36492 |
36771 |
. |
- |
. |
ID=Dca19751.1.exon2;Parent=Dca19751.1 |
| scaffold2035 |
Augustus |
exon |
36901 |
37722 |
. |
- |
. |
ID=Dca19751.1.exon3;Parent=Dca19751.1 |
