Carnation DB

Dca26929.1

Annotation

8-exons
f-1
sp|B9I331_POPTR#5-formyltetrahydrofolate cyclo-ligase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=5FCL#GO:0030272;GO:0005524;GO:0009396#2F1P0C
Repeat List (scaffold268)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26929.1	4	245	248	66.53	242	69	4e-87
Target_name	Start	End	Length	Cov(%)
sp\|B9I331_POPTR	39	275	276	85.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26929.1	7	244	248	62.5	238	66	2e-80
Target_name	Start	End	Length	Cov(%)
AT5G13050.1	44	277	277	84.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold268	Augus-PASA	mRNA	18074	22112	.	-	.	ID=Dca26929.1;Parent=Dca26929
scaffold268	Augus-PASA	exon	18074	18092	.	-	.	ID=Dca26929.1.exon1;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	18473	18599	.	-	.	ID=Dca26929.1.exon2;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	18693	18763	.	-	.	ID=Dca26929.1.exon3;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	18991	19036	.	-	.	ID=Dca26929.1.exon4;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	19135	19176	.	-	.	ID=Dca26929.1.exon5;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	19540	19704	.	-	.	ID=Dca26929.1.exon6;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	19984	20124	.	-	.	ID=Dca26929.1.exon7;Parent=Dca26929.1
scaffold268	Augus-PASA	exon	21977	22112	.	-	.	ID=Dca26929.1.exon8;Parent=Dca26929.1