Dca31012.1
Annotation
- 3-exons
- f-1
- sp|D9ZHD0_HYPPE#Retrotransposon protein#Hypericum perforatum (St John's wort)#Name=RT3#GO:0003676#1F0P0C
- Repeat List (scaffold311)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31012.1 |
65 |
492 |
515 |
30.48 |
428 |
32 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D9ZHD0_HYPPE |
75 |
568 |
593 |
83.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31012.1 |
51 |
310 |
515 |
15.72 |
260 |
31 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G29090.1 |
30 |
292 |
575 |
45.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold311 |
Augustus |
mRNA |
222921 |
224817 |
. |
- |
. |
ID=Dca31012.1;Parent=Dca31012 |
| scaffold311 |
Augustus |
exon |
222921 |
223538 |
. |
- |
. |
ID=Dca31012.1.exon1;Parent=Dca31012.1 |
| scaffold311 |
Augustus |
exon |
223762 |
224513 |
. |
- |
. |
ID=Dca31012.1.exon2;Parent=Dca31012.1 |
| scaffold311 |
Augustus |
exon |
224640 |
224817 |
. |
- |
. |
ID=Dca31012.1.exon3;Parent=Dca31012.1 |
