Dca31149.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold313)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31149.1 |
2 |
196 |
196 |
65.3 |
195 |
56 |
1e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
363 |
964 |
23.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31149.1 |
2 |
193 |
196 |
39.28 |
192 |
34 |
3e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
777 |
1428 |
16.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold313 |
Augustus |
mRNA |
18403 |
19082 |
. |
- |
. |
ID=Dca31149.1;Parent=Dca31149 |
| scaffold313 |
Augustus |
exon |
18403 |
18668 |
. |
- |
. |
ID=Dca31149.1.exon1;Parent=Dca31149.1 |
| scaffold313 |
Augustus |
exon |
18758 |
19082 |
. |
- |
. |
ID=Dca31149.1.exon2;Parent=Dca31149.1 |
