Carnation DB

Dca32580.1

Annotation

8-exons
f-1
sp|F6HE14_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g00420#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT1G48100.1 | Symbols: | Pectin lyase-like superfamily protein | chr1:17766921-17769625 FORWARD LENGTH=475
Repeat List (scaffold330)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32580.1	29	557	557	54.75	529	58	4e-163
Target_name	Start	End	Length	Cov(%)
sp\|F6HE14_VITVI	24	477	477	95.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32580.1	6	546	557	53.32	541	55	2e-156
Target_name	Start	End	Length	Cov(%)
AT1G48100.1	1	463	475	97.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold330	Augustus	mRNA	144568	154418	.	-	.	ID=Dca32580.1;Parent=Dca32580
scaffold330	Augustus	exon	144568	145072	.	-	.	ID=Dca32580.1.exon1;Parent=Dca32580.1
scaffold330	Augustus	exon	147256	147337	.	-	.	ID=Dca32580.1.exon2;Parent=Dca32580.1
scaffold330	Augustus	exon	147910	148117	.	-	.	ID=Dca32580.1.exon3;Parent=Dca32580.1
scaffold330	Augustus	exon	148966	149010	.	-	.	ID=Dca32580.1.exon4;Parent=Dca32580.1
scaffold330	Augustus	exon	149507	149674	.	-	.	ID=Dca32580.1.exon5;Parent=Dca32580.1
scaffold330	Augustus	exon	152057	152101	.	-	.	ID=Dca32580.1.exon6;Parent=Dca32580.1
scaffold330	Augus-PASA	exon	152598	152765	.	-	.	ID=Dca32580.1.exon7;Parent=Dca32580.1
scaffold330	Augus-PASA	exon	153966	154418	.	-	.	ID=Dca32580.1.exon8;Parent=Dca32580.1