Dca33783.1
Annotation
- 2-exons
- f-1
- sp|O49145_CARAS#Polyprotein#Cardaminopsis arenosa (Sand rock-cress) (Arabidopsis arenosa)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold346)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33783.1 |
11 |
158 |
184 |
45.1 |
148 |
55 |
1e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O49145_CARAS |
636 |
786 |
1390 |
10.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33783.1 |
9 |
129 |
184 |
27.71 |
121 |
43 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0380700-01 |
25 |
145 |
174 |
69.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold346 |
Augustus |
mRNA |
89744 |
91379 |
. |
+ |
. |
ID=Dca33783.1;Parent=Dca33783 |
| scaffold346 |
Augustus |
exon |
89744 |
89780 |
. |
+ |
. |
ID=Dca33783.1.exon1;Parent=Dca33783.1 |
| scaffold346 |
Augustus |
exon |
90862 |
91379 |
. |
+ |
. |
ID=Dca33783.1.exon2;Parent=Dca33783.1 |
