Dca39022.1
Annotation
- 4-exons
- f-1
- sp|A5CAG9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007652#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4200)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39022.1 |
1128 |
1705 |
1959 |
15.97 |
578 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CAG9_VITVI |
1001 |
1525 |
1551 |
33.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39022.1 |
729 |
1140 |
1959 |
7.14 |
412 |
34 |
2e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
398 |
591 |
65.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4200 |
Augustus |
mRNA |
17875 |
27715 |
. |
- |
. |
ID=Dca39022.1;Parent=Dca39022 |
| scaffold4200 |
Augustus |
exon |
17875 |
18027 |
. |
- |
. |
ID=Dca39022.1.exon1;Parent=Dca39022.1 |
| scaffold4200 |
Augustus |
exon |
20229 |
20838 |
. |
- |
. |
ID=Dca39022.1.exon2;Parent=Dca39022.1 |
| scaffold4200 |
Augustus |
exon |
21745 |
26269 |
. |
- |
. |
ID=Dca39022.1.exon3;Parent=Dca39022.1 |
| scaffold4200 |
Augustus |
exon |
27124 |
27715 |
. |
- |
. |
ID=Dca39022.1.exon4;Parent=Dca39022.1 |
