Dca41003.1
Annotation
- 4-exons
- f-1
- sp|F6HZ65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00740#GO:0004553;GO:0005975#1F1P0C
- sp|B9GSC6_POPTR#Glycosyl hydrolase family 9#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_850247#GO:0004553;GO:0005975#1F1P0C
- Repeat List (scaffold4513)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41003.1 |
2 |
258 |
258 |
77.51 |
257 |
78 |
5e-123
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HZ65_VITVI |
255 |
511 |
511 |
50.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41003.1 |
2 |
258 |
258 |
72.09 |
257 |
73 |
4e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G02290.1 |
260 |
516 |
516 |
49.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4513 |
Augustus |
mRNA |
12667 |
13740 |
. |
+ |
. |
ID=Dca41003.1;Parent=Dca41003 |
| scaffold4513 |
Augustus |
exon |
12667 |
12834 |
. |
+ |
. |
ID=Dca41003.1.exon1;Parent=Dca41003.1 |
| scaffold4513 |
Augustus |
exon |
12924 |
13035 |
. |
+ |
. |
ID=Dca41003.1.exon2;Parent=Dca41003.1 |
| scaffold4513 |
Augustus |
exon |
13163 |
13326 |
. |
+ |
. |
ID=Dca41003.1.exon3;Parent=Dca41003.1 |
| scaffold4513 |
Augustus |
exon |
13408 |
13740 |
. |
+ |
. |
ID=Dca41003.1.exon4;Parent=Dca41003.1 |
