Carnation DB

Dca4197.1

Annotation

6-exons
f-1
sp|E0CTT3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01970#GO:0005524;GO:0004674#2F0P0C
sp|B9S327_RICCO#Serine/threonine-protein kinase PBS1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1194910#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold1155)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4197.1	1	377	379	78.36	377	79	1e-174
Target_name	Start	End	Length	Cov(%)
sp\|E0CTT3_VITVI	21	395	398	94.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4197.1	1	373	379	74.93	373	76	4e-165
Target_name	Start	End	Length	Cov(%)
AT3G58690.1	21	392	400	93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1155	Augustus	mRNA	71955	74891	.	-	.	ID=Dca4197.1;Parent=Dca4197
scaffold1155	Augustus	exon	71955	72227	.	-	.	ID=Dca4197.1.exon1;Parent=Dca4197.1
scaffold1155	Augustus	exon	72434	72566	.	-	.	ID=Dca4197.1.exon2;Parent=Dca4197.1
scaffold1155	Augustus	exon	72650	72908	.	-	.	ID=Dca4197.1.exon3;Parent=Dca4197.1
scaffold1155	Augustus	exon	73090	73225	.	-	.	ID=Dca4197.1.exon4;Parent=Dca4197.1
scaffold1155	Augustus	exon	73335	73579	.	-	.	ID=Dca4197.1.exon5;Parent=Dca4197.1
scaffold1155	Augustus	exon	74798	74891	.	-	.	ID=Dca4197.1.exon6;Parent=Dca4197.1