Dca4335.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1160)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4335.1 |
3 |
232 |
235 |
50.63 |
230 |
46 |
2e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1235 |
1497 |
1499 |
17.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4335.1 |
1 |
235 |
235 |
34.46 |
235 |
30 |
9e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1214 |
1478 |
1539 |
17.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1160 |
Augustus |
mRNA |
29966 |
30767 |
. |
- |
. |
ID=Dca4335.1;Parent=Dca4335 |
| scaffold1160 |
Augustus |
exon |
29966 |
30226 |
. |
- |
. |
ID=Dca4335.1.exon1;Parent=Dca4335.1 |
| scaffold1160 |
Augustus |
exon |
30321 |
30767 |
. |
- |
. |
ID=Dca4335.1.exon2;Parent=Dca4335.1 |
