Carnation DB

Dca44185.1

Annotation

8-exons
f-1
sp|A5BCQ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025518#GO:0003676;GO:0015074#1F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold5061)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44185.1	1	1278	1577	35.82	1278	44	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BCQ9_VITVI	221	1454	1461	84.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44185.1	216	1264	1577	22.25	1049	33	4e-169
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	360	1405	1428	73.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5061	Augustus	mRNA	26803	38042	.	+	.	ID=Dca44185.1;Parent=Dca44185
scaffold5061	Augustus	exon	26803	30706	.	+	.	ID=Dca44185.1.exon1;Parent=Dca44185.1
scaffold5061	Augustus	exon	33877	34015	.	+	.	ID=Dca44185.1.exon2;Parent=Dca44185.1
scaffold5061	Augustus	exon	35900	36008	.	+	.	ID=Dca44185.1.exon3;Parent=Dca44185.1
scaffold5061	Augustus	exon	36149	36285	.	+	.	ID=Dca44185.1.exon4;Parent=Dca44185.1
scaffold5061	Augustus	exon	36489	36625	.	+	.	ID=Dca44185.1.exon5;Parent=Dca44185.1
scaffold5061	Augustus	exon	37134	37240	.	+	.	ID=Dca44185.1.exon6;Parent=Dca44185.1
scaffold5061	Augustus	exon	37400	37527	.	+	.	ID=Dca44185.1.exon7;Parent=Dca44185.1
scaffold5061	Augustus	exon	37970	38042	.	+	.	ID=Dca44185.1.exon8;Parent=Dca44185.1