Carnation DB

Dca44478.1

Annotation

6-exons
f-1
sp|A5C725_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_033604#unknown#0F0P0C
AT4G14990.1 | Symbols: | Topoisomerase II-associated protein PAT1 | chr4:8566259-8569511 REVERSE LENGTH=787
Repeat List (scaffold512)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44478.1	30	833	849	53.23	804	52	0
Target_name	Start	End	Length	Cov(%)
sp\|A5C725_VITVI	12	865	867	98.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44478.1	30	811	849	46.99	782	50	0
Target_name	Start	End	Length	Cov(%)
AT4G14990.1	12	764	787	95.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold512	Augustus	mRNA	51311	59449	.	+	.	ID=Dca44478.1;Parent=Dca44478
scaffold512	Augustus	exon	51311	51419	.	+	.	ID=Dca44478.1.exon1;Parent=Dca44478.1
scaffold512	Augustus	exon	51885	52033	.	+	.	ID=Dca44478.1.exon2;Parent=Dca44478.1
scaffold512	Augustus	exon	53176	53238	.	+	.	ID=Dca44478.1.exon3;Parent=Dca44478.1
scaffold512	Augustus	exon	54962	55037	.	+	.	ID=Dca44478.1.exon4;Parent=Dca44478.1
scaffold512	Augustus	exon	55946	58044	.	+	.	ID=Dca44478.1.exon5;Parent=Dca44478.1
scaffold512	Augustus	exon	59396	59449	.	+	.	ID=Dca44478.1.exon6;Parent=Dca44478.1