Dca47031.1
Annotation
- 3-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5678)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47031.1 |
38 |
124 |
532 |
7.14 |
87 |
43 |
4e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
631 |
719 |
1038 |
8.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47031.1 |
38 |
116 |
532 |
7.14 |
79 |
45 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
661 |
746 |
1428 |
6.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5678 |
Augustus |
mRNA |
5473 |
9697 |
. |
+ |
. |
ID=Dca47031.1;Parent=Dca47031 |
| scaffold5678 |
Augustus |
exon |
5473 |
5841 |
. |
+ |
. |
ID=Dca47031.1.exon1;Parent=Dca47031.1 |
| scaffold5678 |
Augustus |
exon |
7459 |
8571 |
. |
+ |
. |
ID=Dca47031.1.exon2;Parent=Dca47031.1 |
| scaffold5678 |
Augustus |
exon |
9581 |
9697 |
. |
+ |
. |
ID=Dca47031.1.exon3;Parent=Dca47031.1 |
