Dca4729.1
Annotation
- 2-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1179)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4729.1 |
1 |
241 |
243 |
65.84 |
241 |
55 |
2e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
889 |
1184 |
1184 |
25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4729.1 |
1 |
148 |
243 |
20.57 |
148 |
34 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1135 |
1274 |
1428 |
9.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1179 |
Augustus |
mRNA |
11897 |
12805 |
. |
+ |
. |
ID=Dca4729.1;Parent=Dca4729 |
| scaffold1179 |
Augustus |
exon |
11897 |
12337 |
. |
+ |
. |
ID=Dca4729.1.exon1;Parent=Dca4729.1 |
| scaffold1179 |
Augustus |
exon |
12515 |
12805 |
. |
+ |
. |
ID=Dca4729.1.exon2;Parent=Dca4729.1 |
