Carnation DB

Dca50147.1

Annotation

11-exons
f-1
sp|B9HYQ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_771207#GO:0005524;GO:0004674;GO:0005529;GO:0048544#3F1P0C
AT1G11330.2 | Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842
Repeat List (scaffold634)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50147.1	765	1001	1001	14.68	237	59	2e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9HYQ3_POPTR	430	679	832	30.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50147.1	772	1001	1001	14.28	230	59	1e-78
Target_name	Start	End	Length	Cov(%)
AT1G11330.2	447	689	842	28.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold634	Augustus	mRNA	173600	181473	.	-	.	ID=Dca50147.1;Parent=Dca50147
scaffold634	Augustus	exon	173600	173838	.	-	.	ID=Dca50147.1.exon1;Parent=Dca50147.1
scaffold634	Augustus	exon	173962	174172	.	-	.	ID=Dca50147.1.exon2;Parent=Dca50147.1
scaffold634	Augustus	exon	174250	174410	.	-	.	ID=Dca50147.1.exon3;Parent=Dca50147.1
scaffold634	Augustus	exon	174522	174626	.	-	.	ID=Dca50147.1.exon4;Parent=Dca50147.1
scaffold634	Augustus	exon	178535	178742	.	-	.	ID=Dca50147.1.exon5;Parent=Dca50147.1
scaffold634	Augustus	exon	178817	178961	.	-	.	ID=Dca50147.1.exon6;Parent=Dca50147.1
scaffold634	Augustus	exon	179061	179298	.	-	.	ID=Dca50147.1.exon7;Parent=Dca50147.1
scaffold634	Augustus	exon	179409	179619	.	-	.	ID=Dca50147.1.exon8;Parent=Dca50147.1
scaffold634	Augustus	exon	179697	179857	.	-	.	ID=Dca50147.1.exon9;Parent=Dca50147.1
scaffold634	Augustus	exon	179969	180073	.	-	.	ID=Dca50147.1.exon10;Parent=Dca50147.1
scaffold634	Augustus	exon	180252	181473	.	-	.	ID=Dca50147.1.exon11;Parent=Dca50147.1