Dca52303.1
Annotation
- 4-exons
- f-1
- sp|F6HZQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04190#GO:0005694;GO:0005634;GO:0018024;GO:0008270#2F0P2C
- sp|B9SKN2_RICCO#Set domain protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0542660#GO:0005694;GO:0005634;GO:0018024;GO:0008270#2F0P2C
- Repeat List (scaffold688)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52303.1 |
8 |
330 |
337 |
41.54 |
323 |
35 |
4e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HZQ2_VITVI |
6 |
393 |
848 |
45.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52303.1 |
1 |
331 |
337 |
32.64 |
331 |
32 |
7e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G43990.2 |
24 |
335 |
740 |
42.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold688 |
Augustus |
mRNA |
75890 |
78157 |
. |
+ |
. |
ID=Dca52303.1;Parent=Dca52303 |
| scaffold688 |
Augustus |
exon |
75890 |
76078 |
. |
+ |
. |
ID=Dca52303.1.exon1;Parent=Dca52303.1 |
| scaffold688 |
Augus-PASA |
exon |
76377 |
76415 |
. |
+ |
. |
ID=Dca52303.1.exon2;Parent=Dca52303.1 |
| scaffold688 |
Augus-PASA |
exon |
76498 |
76912 |
. |
+ |
. |
ID=Dca52303.1.exon3;Parent=Dca52303.1 |
| scaffold688 |
Augus-PASA |
exon |
77787 |
78157 |
. |
+ |
. |
ID=Dca52303.1.exon4;Parent=Dca52303.1 |
