Dca26594.1
Annotation
- 2-exons
- f-1
- sp|Q10IL4_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g33850#GO:0003676#1F0P0C
- Repeat List (scaffold26403)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26594.1 |
1 |
198 |
200 |
56.99 |
198 |
57 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10IL4_ORYSJ |
363 |
562 |
562 |
35.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26594.1 |
68 |
181 |
200 |
24 |
114 |
42 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1269 |
1380 |
1401 |
7.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold26403 |
Augustus |
mRNA |
5407 |
6188 |
. |
- |
. |
ID=Dca26594.1;Parent=Dca26594 |
| scaffold26403 |
Augustus |
exon |
5407 |
5801 |
. |
- |
. |
ID=Dca26594.1.exon1;Parent=Dca26594.1 |
| scaffold26403 |
Augustus |
exon |
5981 |
6188 |
. |
- |
. |
ID=Dca26594.1.exon2;Parent=Dca26594.1 |
