Carnation DB

Dca3403.1

Annotation

8-exons
f-1
sp|B9T5Q9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0366280#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
sp|B9H6Q2_POPTR#AP2 domain-containing transcription factor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=RAP10#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold1120)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3403.1	81	626	628	49.36	546	51	2e-143
Target_name	Start	End	Length	Cov(%)
sp\|B9T5Q9_RICCO	73	609	610	88.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3403.1	74	626	628	42.19	553	47	9e-124
Target_name	Start	End	Length	Cov(%)
AT4G37750.1	73	554	555	86.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1120	Augustus	mRNA	56355	59559	.	+	.	ID=Dca3403.1;Parent=Dca3403
scaffold1120	Augustus	exon	56355	56655	.	+	.	ID=Dca3403.1.exon1;Parent=Dca3403.1
scaffold1120	Augustus	exon	56778	57411	.	+	.	ID=Dca3403.1.exon2;Parent=Dca3403.1
scaffold1120	Augustus	exon	57501	57583	.	+	.	ID=Dca3403.1.exon3;Parent=Dca3403.1
scaffold1120	Augustus	exon	57857	57945	.	+	.	ID=Dca3403.1.exon4;Parent=Dca3403.1
scaffold1120	Augustus	exon	58078	58151	.	+	.	ID=Dca3403.1.exon5;Parent=Dca3403.1
scaffold1120	Augustus	exon	58248	58298	.	+	.	ID=Dca3403.1.exon6;Parent=Dca3403.1
scaffold1120	Augustus	exon	58416	58492	.	+	.	ID=Dca3403.1.exon7;Parent=Dca3403.1
scaffold1120	Augustus	exon	58982	59559	.	+	.	ID=Dca3403.1.exon8;Parent=Dca3403.1