Dca8872.1
Annotation
- 4-exons
- f-1
- sp|C6SYQ2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
- AT5G49540.1 | Symbols: | Rab5-interacting family protein | chr5:20104804-20105609 REVERSE LENGTH=114
- Repeat List (scaffold1379)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8872.1 |
1 |
117 |
117 |
73.5 |
117 |
72 |
4e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C6SYQ2_SOYBN |
1 |
120 |
120 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca8872.1 |
5 |
117 |
117 |
64.95 |
113 |
68 |
6e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G49540.1 |
2 |
114 |
114 |
99.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1379 |
Augustus |
mRNA |
57238 |
59477 |
. |
+ |
. |
ID=Dca8872.1;Parent=Dca8872 |
| scaffold1379 |
Augustus |
exon |
57238 |
57344 |
. |
+ |
. |
ID=Dca8872.1.exon1;Parent=Dca8872.1 |
| scaffold1379 |
Augus-PASA |
exon |
58013 |
58208 |
. |
+ |
. |
ID=Dca8872.1.exon2;Parent=Dca8872.1 |
| scaffold1379 |
Augus-PASA |
exon |
59052 |
59071 |
. |
+ |
. |
ID=Dca8872.1.exon3;Parent=Dca8872.1 |
| scaffold1379 |
Augus-PASA |
exon |
59447 |
59477 |
. |
+ |
. |
ID=Dca8872.1.exon4;Parent=Dca8872.1 |
